Data structures based on k -mers for querying large collections of sequencing data sets

Camille Marchet (1) , Christina Boucher (2) , Simon Puglisi (3) , Paul Medvedev (4) , Mikaël Salson (1) , Rayan Chikhi

1 CRIStAL - Centre de Recherche en Informatique, Signal et Automatique de Lille - UMR 9189
2 UF - University of Florida [Gainesville]
3 Helsingin yliopisto = Helsingfors universitet = University of Helsinki
4 Penn State - Pennsylvania State University

Domaines: Bio-informatique [q-bio.QM]

Camille Marchet, Christina Boucher, Simon Puglisi, Paul Medvedev, Mikaël Salson, et al.. Data structures based on k -mers for querying large collections of sequencing data sets. Genome Research, 2021, 31 (1), pp.1-12. ⟨10.1101/gr.260604.119⟩. ⟨hal-03165261⟩