D. Barthélémy and Y. Caraglio, Plant Architecture: A Dynamic, Multilevel and Comprehensive Approach to Plant Form, Structure and Ontogeny, Annals of Botany, vol.99, issue.3, pp.375-407, 2007.
DOI : 10.1093/aob/mcl260

C. C. Berg and P. Franco, Flora neotropica monograph 94. Cecropia. Organization for Flora Neotropica, 2005.

P. Cournède, M. Z. Kang, A. Mathieu, J. Barczi, H. P. Yan et al., Structural Factorization of Plants to Compute Their Functional and Architectural Growth, SIMULATION, vol.82, issue.7, pp.82-427, 2006.
DOI : 10.1177/0037549706069341

P. Cournède, V. Letort, A. Mathieu, M. Z. Kang, S. Lemaire et al., Some Parameter Estimation Issues in Functional-Structural Plant Modelling, Mathematical Modelling of Natural Phenomena, vol.6, issue.2, pp.133-159, 2011.
DOI : 10.1051/mmnp/20116205

J. Evers, J. Vos, X. Yin, P. Romero, P. E. Van-der-putten et al., Simulation of wheat growth and development based on organ-level photosynthesis and assimilate allocation, Journal of Experimental Botany, vol.61, issue.8, pp.61-2203, 2010.
DOI : 10.1093/jxb/erq025

J. Evers, A. Van-der-krol, J. Vos, and P. C. Struik, Understanding shoot branching by modelling form and function, Trends in Plant Science, vol.16, issue.9, pp.464-467, 2011.
DOI : 10.1016/j.tplants.2011.05.004

T. Fourcaud, X. P. Zhang, A. Stokes, H. Lambers, and C. Körner, Plant Growth Modelling and Applications: The Increasing Importance of Plant Architecture in Growth Models, Annals of Botany, vol.101, issue.8, pp.1053-1063, 2008.
DOI : 10.1093/aob/mcn050

URL : https://hal.archives-ouvertes.fr/halsde-00281936

C. Godin, Representing and encoding plant architecture: A review, Annals of Forest Science, vol.57, issue.5, pp.413-438, 2000.
DOI : 10.1051/forest:2000132

URL : https://hal.archives-ouvertes.fr/hal-00883351

Y. Guédon, D. Barthélémy, Y. Caraglio, and E. Costes, Pattern Analysis in Branching and Axillary Flowering Sequences, Journal of Theoretical Biology, vol.212, issue.4, pp.481-520, 2001.
DOI : 10.1006/jtbi.2001.2392

E. Heuvelink, Dry Matter Partitioning in Tomato: Validation of a Dynamic Simulation Model Annals of Botany, pp.71-80, 1996.

E. Heuvelink, Evaluation of a Dynamic Simulation Model for Tomato Crop Growth and Development Annals of Botany, pp.413-422, 1999.

P. Heuret, D. Barthélémy, Y. Guédon, X. Coulmier, and J. Tancre, Synchronization of growth, branching and flowering processes in the South American tropical tree Cecropia obtusa (Cecropiaceae), American Journal of Botany, vol.89, issue.7, pp.1180-1187, 2002.
DOI : 10.3732/ajb.89.7.1180

URL : https://hal.archives-ouvertes.fr/hal-00827469

F. Hallé and R. A. Oldeman, Essai sur l'architecture et la dynamique de croissance des arbres tropicaux, 1970.

S. Kirkpatrick, C. Gelatt, and M. Vecchi, Optimization by Simulated Annealing, Science, vol.220, issue.4598, pp.671-680, 1983.
DOI : 10.1126/science.220.4598.671

K. Kitajima, S. Mulkey, M. Samaniego, and J. Wright, Decline of photosynthetic capacity with leaf age and position in two tropical pioneer tree species, American Journal of Botany, vol.89, issue.12, pp.1243-1254, 1925.
DOI : 10.3732/ajb.89.12.1925

V. Letort, P. Heuret, P. C. Zalamea, E. Nicolini, and P. De-reffye, Analysis of Cecropia sciadophylla Morphogenesis Based on a Sink, Source Dynamic Model International Symposium on Plant Growth Modeling and Applications (PMA09), pp.10-17, 2009.
URL : https://hal.archives-ouvertes.fr/hal-00546782

V. Letort, P. Heuret, P. C. Zalamea, E. Nicolini, and P. De-reffye, Analysing the effects of local environment on the sourcesink balance of Cecropia sciadophylla: a methodological approach based on model inversion, Annals of Forest Science, pp.69-167, 2012.
URL : https://hal.archives-ouvertes.fr/hal-00780347

D. Luquet, M. Dingkuhn, H. Kim, L. Tambour, A. Clément et al., , a model of morphogenesis and competition among sinks in rice. 1. Concept, validation and sensitivity analysis, Functional Plant Biology, vol.33, issue.4, pp.309-323, 1071.
DOI : 10.1071/FP05266

Y. T. Ma, A. M. Wubs, A. Mathieu, E. Heuvelink, J. Y. Zhu et al., Simulation of fruitset and trophic competition and optimization of yield advantages in six Capsicum cultivars using functional-structural plant modelling Annals of Botany, pp.793-803, 2011.

L. F. Marcelis, A Simulation Model for Dry Matter Partitioning in Cucumber Annals of Botany, pp.43-52, 1994.

L. F. Marcelis, E. Heuvelink, L. Baan-hofman-eijer, J. Den-bakker, and L. B. Xue, Flower and fruit abortion in sweet pepper in relation to source and sink strength, Journal of Experimental Botany, vol.55, issue.406, pp.55-77, 2004.
DOI : 10.1093/jxb/erh245

A. Mathieu, P. Cournède, D. Barthélémy, and P. De-reffye, Conditions for the Generation of Rhythms in a Discrete Dynamic System, 2006 Second International Symposium on Plant Growth Modeling and Applications, pp.26-33, 2007.
DOI : 10.1109/PMA.2006.11

A. Mathieu, B. G. Zhang, E. Heuvelink, S. J. Liu, P. Cournède et al., Calibration of fruit cyclic patterns in cucumber plants as a function of source-sink ratio with the Greenlab model, Proceedings of the 5th international workshop on FSPM, 2007.

A. Mathieu, P. Cournède, V. Letort, D. Barthélémy, and P. De-reffye, A dynamic model of plant growth with interactions between development and functional mechanisms to study plant structural plasticity related to trophic competition, Annals of Botany, vol.103, issue.8, pp.1173-1186, 2009.
DOI : 10.1093/aob/mcp054

URL : https://hal.archives-ouvertes.fr/halsde-00418643

A. Mathieu, P. Cournède, D. Barthélémy, and P. De-reffye, Rhythms and alternating patterns in plants as emergent properties of a model of interaction between development and functioning Annals of Botany, pp.1233-1242, 2008.

M. V. Mickelbart, G. S. Bender, G. W. Witney, C. Adams, and M. L. Arpaia, Effects of clonal rootstocks on ???Hass??? avocado yield components, alternate bearing, and nutrition, The Journal of Horticultural Science and Biotechnology, vol.82, issue.3, pp.82-460, 2007.
DOI : 10.1080/14620316.2007.11512259

S. P. Monselise and E. E. Goldschmidt, Alternate bearing in fruit trees, Horticultural Reviews, vol.4, pp.128-173, 1982.
DOI : 10.1002/9781118060773.ch5

P. De-reffye, M. Goursat, J. Quadrat, and B. G. Hu, The Dynamic Equations of the Tree Morphogenesis Greenlab Model, 2003.
URL : https://hal.archives-ouvertes.fr/inria-00071706

S. Sabatier and D. Barthélémy, Growth Dynamics and Morphology of Annual Shoots, According to their Architectural Position, in Young Cedrus atlantica (Endl.) Manetti ex Carri??re (Pinaceae), Annals of Botany, vol.84, issue.3, pp.387-392, 1999.
DOI : 10.1006/anbo.1999.0939

A. Schapendonk and P. Brouwer, Fruit growth of cucumber in relation to assimilate supply and sink activity, Scientia Horticulturae, vol.23, issue.1, pp.21-33, 1984.
DOI : 10.1016/0304-4238(84)90041-4

J. Schupp, Alternate Bearing in Fruit Crops, 2011.

K. Shinozaki, K. Yoda, K. Hozumi, and T. Kira, A quantitative analysis of plant form -the pipe model theory i. basic analysis, Japanese Journal of Ecology, vol.14, pp.97-105, 1964.

R. Sievänen, E. Nikinmaa, P. Nygren, H. Ozier-lafontaine, J. Perttunen et al., Components of functional-structural tree models, Annals of Forest Science, vol.57, issue.5, pp.399-412, 2000.
DOI : 10.1051/forest:2000131

U. Van-meeteren and H. Van-gelder, ROLE OF FLOWER BUDS IN FLOWER BUD ABSCISSION IN HIBISCUS, Acta Horticulturae, issue.405, pp.284-289, 1995.
DOI : 10.17660/ActaHortic.1995.405.37

J. S. Verreynne and C. J. Lovatt, The Effect of Crop Load on Budbreak Influences Return Bloom in Alternate Bearing 'Pixie' Mandarin, Journal of the American Society for Horticultural Science, pp.134-299, 2009.

J. Warren-wilson, Ecological data on dry matter production by plants and plant communities. The collection and processing of field data, pp.77-123, 1967.

P. C. Zalamea, P. R. Stevenson, S. Madrinan, P. M. Aubert, and P. Heuret, Growth pattern and age determination for Cecropia sciadophylla (Urticaceae), American Journal of Botany, vol.95, issue.3, pp.95-263, 2008.
DOI : 10.3732/ajb.95.3.263

URL : https://hal.archives-ouvertes.fr/halsde-00291816